STRINGSTRING
PBAL39_18204 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_18204" - Competence protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_18204Competence protein (588 aa)    
Predicted Functional Partners:
PBAL39_18199
Uncharacterized protein (675 aa)
              0.860
PBAL39_04908
Putative amidophosphoribosyl-transferase (232 aa)
 
   
  0.740
PBAL39_11255
Magnesium chelatase, subunit ChlI (143 aa)
   
   
  0.681
PBAL39_18194
Transcriptional regulator (111 aa)
   
        0.681
PBAL39_10990
Magnesium chelatase, subunit ChlI (393 aa)
   
   
  0.669
PBAL39_13642
Putative DNA processing Smf-like protein (365 aa)
 
   
  0.654
PBAL39_12568
Uncharacterized protein (341 aa)
 
        0.618
PBAL39_18189
Alanyl-tRNA synthetase ; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (900 aa)
              0.577
PBAL39_18209
Probable enoyl-CoA hydratase (259 aa)
              0.569
nadD
Nicotinate mononucleotide adenylyltransferase ; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) (190 aa)
 
        0.530
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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