Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM34547.1 | EDM36851.1 | PBAL39_11135 | PBAL39_18294 | COG2217 Cation transport ATPase. | Cation efflux protein; COG0053 Predicted Co/Zn/Cd cation transporters; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.406 |
EDM36850.1 | EDM36851.1 | PBAL39_18289 | PBAL39_18294 | Hypothetical protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. | Cation efflux protein; COG0053 Predicted Co/Zn/Cd cation transporters; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.877 |
EDM36850.1 | EDM36852.1 | PBAL39_18289 | PBAL39_18299 | Hypothetical protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. | COG0436 Aspartate/tyrosine/aromatic aminotransferase. | 0.722 |
EDM36851.1 | EDM34547.1 | PBAL39_18294 | PBAL39_11135 | Cation efflux protein; COG0053 Predicted Co/Zn/Cd cation transporters; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | COG2217 Cation transport ATPase. | 0.406 |
EDM36851.1 | EDM36850.1 | PBAL39_18294 | PBAL39_18289 | Cation efflux protein; COG0053 Predicted Co/Zn/Cd cation transporters; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Hypothetical protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. | 0.877 |
EDM36851.1 | EDM36852.1 | PBAL39_18294 | PBAL39_18299 | Cation efflux protein; COG0053 Predicted Co/Zn/Cd cation transporters; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | COG0436 Aspartate/tyrosine/aromatic aminotransferase. | 0.764 |
EDM36851.1 | mdh | PBAL39_18294 | PBAL39_06851 | Cation efflux protein; COG0053 Predicted Co/Zn/Cd cation transporters; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.599 |
EDM36852.1 | EDM36850.1 | PBAL39_18299 | PBAL39_18289 | COG0436 Aspartate/tyrosine/aromatic aminotransferase. | Hypothetical protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. | 0.722 |
EDM36852.1 | EDM36851.1 | PBAL39_18299 | PBAL39_18294 | COG0436 Aspartate/tyrosine/aromatic aminotransferase. | Cation efflux protein; COG0053 Predicted Co/Zn/Cd cation transporters; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.764 |
EDM36852.1 | mdh | PBAL39_18299 | PBAL39_06851 | COG0436 Aspartate/tyrosine/aromatic aminotransferase. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.934 |
mdh | EDM36851.1 | PBAL39_06851 | PBAL39_18294 | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | Cation efflux protein; COG0053 Predicted Co/Zn/Cd cation transporters; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.599 |
mdh | EDM36852.1 | PBAL39_06851 | PBAL39_18299 | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | COG0436 Aspartate/tyrosine/aromatic aminotransferase. | 0.934 |