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PBAL39_18304 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_18304" - ABC transporter efflux protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_18304ABC transporter efflux protein (391 aa)    
Predicted Functional Partners:
PBAL39_03979
Putative HlyD family secretion protein (389 aa)
 
  0.975
PBAL39_08165
Membrane fusion efflux protein, putative (452 aa)
 
  0.975
PBAL39_18334
ABC transporter related protein (252 aa)
  0.962
PBAL39_03984
Putative ABC transporter ATP-binding protein (249 aa)
  0.962
PBAL39_20750
ABC transporter, ATP-binding protein (232 aa)
  0.953
PBAL39_20730
ABC transporter, ATPase subunit (229 aa)
  0.953
PBAL39_01802
Putative ABC transport system ATP-binding protein (221 aa)
  0.942
PBAL39_04164
Membrane fusion protein possible cation efflux system protein (354 aa)
 
  0.923
PBAL39_16816
Membrane fusion protein possible cation efflux system protein (352 aa)
 
  0.917
PBAL39_20755
Efflux transporter, MFP component, RND family protein (414 aa)
 
  0.910
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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