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PBAL39_18399 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_18399" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_18399Uncharacterized protein (423 aa)    
Predicted Functional Partners:
PBAL39_18394
Putative carboxypeptidase (Putative secreted protein) (396 aa)
              0.748
PBAL39_18389
Probable acylaminoacyl-peptidase (947 aa)
              0.748
ribBA
Riboflavin biosynthesis protein RibBA ; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (403 aa)
         
  0.455
yidC
Membrane protein YidC ; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins (598 aa)
              0.450
PBAL39_08821
Pseudouridine synthase (463 aa)
              0.444
PBAL39_04898
Pseudouridine synthase (329 aa)
              0.444
PBAL39_10905
Putative carboxypeptidase (301 aa)
              0.443
PBAL39_02367
Putative carboxypeptidase (333 aa)
              0.443
PBAL39_01542
Uncharacterized protein (722 aa)
 
          0.441
ybeY
Endoribonuclease YbeY ; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3’ terminus of the 16S rRNA (143 aa)
              0.436
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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