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PBAL39_18414 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_18414" - DNA polymerase III, epsilon subunit in Pedobacter sp. BAL39
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PBAL39_18414DNA polymerase III, epsilon subunit (456 aa)    
Predicted Functional Partners:
PBAL39_21660
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (374 aa)
 
 
  0.989
PBAL39_06841
DNA-directed DNA polymerase (1477 aa)
 
  0.972
PBAL39_22320
DNA-directed DNA polymerase (1074 aa)
   
  0.968
PBAL39_07915
DNA polymerase III, tau and gamma subunits (624 aa)
     
  0.962
uvrB
Excinuclease ABC subunit B ; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (678 aa)
 
  0.956
PBAL39_10950
DNA polymerase III gamma/tau subunit (382 aa)
 
  0.935
PBAL39_12007
DNA polymerase I (937 aa)
   
  0.930
PBAL39_12568
Uncharacterized protein (341 aa)
       
  0.912
PBAL39_12152
Pyruvate kinase (476 aa)
   
 
  0.907
PBAL39_08806
UvrABC system protein A ; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate (947 aa)
 
  0.887
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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