STRINGSTRING
PBAL39_18564 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_18564" - Transcriptional regulator in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_18564Transcriptional regulator (145 aa)    
Predicted Functional Partners:
PBAL39_05658
Uncharacterized protein (218 aa)
   
          0.706
PBAL39_18569
YfmJ (331 aa)
              0.662
PBAL39_09571
Magnesium chelatase, subunit ChlI (496 aa)
   
          0.653
PBAL39_08220
Uncharacterized protein (420 aa)
   
          0.647
PBAL39_09566
Uncharacterized protein (365 aa)
   
          0.646
PBAL39_01632
Tetratricopeptide repeat domain protein (111 aa)
   
          0.530
PBAL39_08070
Uncharacterized protein (694 aa)
   
          0.528
PBAL39_18574
Iron-containing alcohol dehydrogenase (386 aa)
              0.496
PBAL39_11587
Uncharacterized protein (1110 aa)
   
          0.476
PBAL39_22760
HlyB/MsbA family ABC transporter (335 aa)
   
          0.451
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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