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PBAL39_18614 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_18614" - Probable SecDF protein-export membrane protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_18614Probable SecDF protein-export membrane protein (488 aa)    
Predicted Functional Partners:
PBAL39_24258
N-acetyl-beta-hexosaminidase (525 aa)
   
          0.710
PBAL39_23893
Uncharacterized protein (524 aa)
   
          0.623
PBAL39_23687
Uncharacterized protein (301 aa)
   
          0.620
PBAL39_24183
Putative outer membrane protein (524 aa)
   
          0.604
PBAL39_18619
Uncharacterized protein (54 aa)
              0.596
PBAL39_24188
Putative outer membrane protein (994 aa)
   
          0.583
PBAL39_23898
Putative outer membrane protein (1088 aa)
   
          0.530
PBAL39_13165
Putative outer membrane receptor (998 aa)
   
          0.527
PBAL39_13170
Uncharacterized protein (402 aa)
   
          0.526
PBAL39_09431
Uncharacterized protein (540 aa)
   
          0.526
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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