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PBAL39_18654 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_18654" - ABC transporter, permease protein, putative in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_18654ABC transporter, permease protein, putative (758 aa)    
Predicted Functional Partners:
PBAL39_18649
ABC transporter, ATPase subunit (313 aa)
 
          0.960
PBAL39_18644
Uncharacterized protein (487 aa)
 
          0.891
PBAL39_18639
Putative outer membrane protein (1197 aa)
 
          0.871
PBAL39_23432
ABC transporter related protein (309 aa)
   
          0.778
PBAL39_22575
ABC transporter related protein (312 aa)
   
          0.778
PBAL39_10256
ABC transporter, ATPase subunit (313 aa)
   
          0.778
PBAL39_07590
ABC transporter, ATPase subunit (309 aa)
   
          0.778
PBAL39_00100
ABC transporter related protein (307 aa)
   
          0.778
PBAL39_21695
ABC-type multidrug transporter, ATP-binding protein gliding motility-associated protein (235 aa)
 
          0.755
PBAL39_00717
Uncharacterized protein (478 aa)
   
          0.724
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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