STRINGSTRING
PBAL39_18684 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_18684" - Transcriptional regulator, AraC family protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_18684Transcriptional regulator, AraC family protein (287 aa)    
Predicted Functional Partners:
PBAL39_24103
Putative AraC family transcriptional regulator (303 aa)
   
          0.752
PBAL39_18679
Putative myo-inositol 1-monophosphatase (275 aa)
              0.638
PBAL39_18674
NAD-dependent epimerase/dehydratase (208 aa)
              0.638
PBAL39_18689
Glycerophosphoryl diester phosphodiesterase (300 aa)
   
        0.584
PBAL39_19534
HI0933-like protein (145 aa)
   
          0.575
PBAL39_24970
Diguanylate cyclase/phosphodiesterase (984 aa)
       
    0.512
PBAL39_19844
Tetratricopeptide TPR_2 (754 aa)
       
    0.512
PBAL39_18759
Periplasmic sensor signal transduction histidine kinase (566 aa)
       
    0.512
PBAL39_13902
Possible sensor protein (663 aa)
       
    0.512
PBAL39_13035
Tetratricopeptide TPR_2 (720 aa)
       
    0.512
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (4%) [HD]