STRINGSTRING
PBAL39_18694 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_18694" - Putative outer membrane protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_18694Putative outer membrane protein (505 aa)    
Predicted Functional Partners:
PBAL39_18699
Putative outer membrane protein (1175 aa)
 
          0.952
PBAL39_00350
Putative outer membrane protein (993 aa)
   
          0.774
PBAL39_24188
Putative outer membrane protein (994 aa)
   
          0.773
PBAL39_00355
Putative outer membrane protein (579 aa)
   
          0.773
PBAL39_14154
Putative outer membrane protein (1139 aa)
   
          0.766
PBAL39_07195
Uncharacterized protein (397 aa)
   
          0.762
PBAL39_24490
Putative outer membrane protein (1045 aa)
   
          0.760
PBAL39_00607
Putative outer membrane protein (1047 aa)
   
          0.758
PBAL39_14159
Uncharacterized protein (511 aa)
   
          0.756
PBAL39_07200
Putative outer membrane protein (1039 aa)
   
          0.752
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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