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PBAL39_18789 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_18789" - Putative endo-1,4-beta-xylanase in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_18789Putative endo-1,4-beta-xylanase (494 aa)    
Predicted Functional Partners:
PBAL39_21305
Putative endo-1,4-beta-xylanase (313 aa)
 
          0.870
PBAL39_24213
Arabinogalactan endo-beta-1,4-galactanase (348 aa)
   
          0.736
PBAL39_17124
Mannan endo-1,4-beta-mannosidase (372 aa)
 
          0.724
PBAL39_01967
Uncharacterized protein (454 aa)
   
          0.708
PBAL39_23752
Uncharacterized protein (526 aa)
   
          0.699
PBAL39_06716
Putative hydrolase (517 aa)
 
          0.699
PBAL39_19579
Uncharacterized protein (377 aa)
   
          0.697
PBAL39_19489
Putatuve glycosylhydrolase (357 aa)
 
          0.694
PBAL39_05083
Uncharacterized protein (780 aa)
   
          0.609
PBAL39_03282
Uncharacterized protein (834 aa)
   
          0.554
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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