STRINGSTRING
PBAL39_18809 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_18809" - Ferrichrome-iron receptor in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_18809Ferrichrome-iron receptor (904 aa)    
Predicted Functional Partners:
PBAL39_13994
Uncharacterized protein (371 aa)
 
        0.799
PBAL39_03329
Cytoplasmic membrane protein (363 aa)
 
        0.786
PBAL39_07785
Uncharacterized protein (448 aa)
 
        0.759
PBAL39_16651
Uncharacterized protein (449 aa)
 
        0.749
PBAL39_20725
ABC-type Fe3+-siderophores transport system (264 aa)
 
 
  0.687
PBAL39_00085
Outer membrane receptor ragA protein (602 aa)
   
          0.678
PBAL39_18804
Putative anti-sigma factor (339 aa)
 
        0.667
PBAL39_18814
Short-chain dehydrogenase/reductase SDR (245 aa)
              0.648
PBAL39_18174
Permease protein of ABC transporter (348 aa)
 
 
  0.638
PBAL39_02655
Putative outer membrane protein (1084 aa)
   
          0.626
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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