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EDM36954.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM36954.1" - COG1629 Outer membrane receptor proteins, mostly Fe transport in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM36954.1COG1629 Outer membrane receptor proteins, mostly Fe transport (904 aa)    
Predicted Functional Partners:
EDM36955.1
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (245 aa)
   
        0.635
EDM35130.1
COG3182 Uncharacterized iron-regulated membrane protein (449 aa)
 
        0.632
EDM35571.1
COG3182 Uncharacterized iron-regulated membrane protein (448 aa)
 
        0.622
EDM36953.1
Putative anti-sigma factor; COG3712 Fe2+-dicitrate sensor, membrane component (339 aa)
   
        0.564
EDM34168.1
COG3182 Uncharacterized iron-regulated membrane protein (363 aa)
   
        0.555
EDM34674.1
COG3182 Uncharacterized iron-regulated membrane protein (371 aa)
 
        0.533
EDM34202.1
COG3182 Uncharacterized iron-regulated membrane protein (246 aa)
 
        0.440
EDM34319.1
annotation not available (227 aa)
 
        0.427
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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