STRINGSTRING
PBAL39_18889 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_18889" - Alpha-mannosidase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_18889Alpha-mannosidase (879 aa)    
Predicted Functional Partners:
PBAL39_18884
Uncharacterized protein (462 aa)
 
          0.969
PBAL39_18879
Uncharacterized protein (771 aa)
 
     
  0.946
PBAL39_18909
Uncharacterized protein (361 aa)
 
          0.848
PBAL39_18869
Putative outer membrane protein (589 aa)
 
          0.842
PBAL39_18844
Putative outer membrane protein (1012 aa)
 
          0.814
PBAL39_18849
Putative outer membrane protein (551 aa)
 
          0.798
PBAL39_23087
Beta-mannosidase (1016 aa)
 
   
  0.786
PBAL39_18854
Putative outer membrane protein (1018 aa)
 
          0.786
PBAL39_14444
Uncharacterized protein (390 aa)
 
          0.759
PBAL39_22852
Transcriptional regulator (242 aa)
   
 
      0.751
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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