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PBAL39_18904 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_18904" - Alpha-L-rhamnosidase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_18904Alpha-L-rhamnosidase (786 aa)    
Predicted Functional Partners:
PBAL39_18909
Uncharacterized protein (361 aa)
 
          0.892
PBAL39_02382
Oxidoreductase domain protein (452 aa)
   
          0.733
PBAL39_18899
Putative alpha-1,2-mannosidase (762 aa)
              0.676
PBAL39_18894
Sialic acid-specific 9-O-acetylesterase (492 aa)
              0.594
PBAL39_16611
Putative glycosyslhydrolase (1031 aa)
 
          0.563
PBAL39_18389
Probable acylaminoacyl-peptidase (947 aa)
   
          0.557
PBAL39_06751
Uncharacterized protein (369 aa)
   
        0.541
PBAL39_13265
Uncharacterized protein (286 aa)
   
          0.485
PBAL39_18889
Alpha-mannosidase (879 aa)
 
          0.479
PBAL39_02407
Putative large, multifunctional secreted protein (477 aa)
   
          0.466
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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