STRINGSTRING
PBAL39_19000 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_19000" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_19000Uncharacterized protein (129 aa)    
Predicted Functional Partners:
PBAL39_21330
Uncharacterized protein (238 aa)
   
          0.764
PBAL39_21025
Uncharacterized protein (255 aa)
   
          0.748
PBAL39_17569
CHU large protein glucose/sorbosone dehydrogenase-related (1367 aa)
   
          0.706
PBAL39_19005
Putative AraC family transcriptional regulator (299 aa)
 
          0.637
PBAL39_18995
Uncharacterized protein (186 aa)
              0.625
PBAL39_00742
Uncharacterized protein (218 aa)
   
          0.614
PBAL39_22690
Uncharacterized protein (221 aa)
   
          0.601
PBAL39_22695
Uncharacterized protein (167 aa)
   
          0.598
PBAL39_10246
Uncharacterized protein (141 aa)
   
          0.592
PBAL39_19140
Uncharacterized protein (67 aa)
   
          0.591
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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