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PBAL39_19050 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_19050" - Short chain dehydrogenase dehydrogenase in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_19050Short chain dehydrogenase dehydrogenase (264 aa)    
Predicted Functional Partners:
PBAL39_19055
Transcriptional regulator, AraC family protein (293 aa)
              0.861
PBAL39_19045
Uncharacterized protein (108 aa)
              0.771
PBAL39_16474
Uncharacterized protein (131 aa)
   
          0.555
PBAL39_23477
Oxidoreductase, short chain dehydrogenase/reductase family protein (229 aa)
   
          0.482
PBAL39_19040
Uncharacterized protein (163 aa)
              0.474
PBAL39_19060
Cyclic nucleotide binding regulatory protein (198 aa)
              0.458
PBAL39_20144
Uncharacterized protein (121 aa)
   
          0.405
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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