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PBAL39_19080 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_19080" - Short-chain dehydrogenase/reductase SDR in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_19080Short-chain dehydrogenase/reductase SDR (287 aa)    
Predicted Functional Partners:
PBAL39_19075
Uncharacterized protein (189 aa)
 
          0.668
PBAL39_02597
Short-chain dehydrogenase (134 aa)
   
          0.635
PBAL39_24088
Probable dehydrogenase/reductase (249 aa)
       
0.498
PBAL39_16409
Short-chain dehydrogenase/reductase SDR (250 aa)
       
0.496
PBAL39_20144
Uncharacterized protein (121 aa)
   
          0.491
PBAL39_16414
Uncharacterized protein (248 aa)
       
0.483
PBAL39_18814
Short-chain dehydrogenase/reductase SDR (245 aa)
       
0.447
PBAL39_07675
Uncharacterized protein (612 aa)
   
          0.444
PBAL39_19070
Isochorismatase hydrolase (77 aa)
              0.441
PBAL39_02527
Lantibiotic dehydratase-like protein (928 aa)
   
          0.414
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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