STRINGSTRING
PBAL39_19140 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_19140" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_19140Uncharacterized protein (67 aa)    
Predicted Functional Partners:
PBAL39_19145
Site-specific recombinase (226 aa)
              0.657
PBAL39_19000
Uncharacterized protein (129 aa)
   
          0.591
PBAL39_19135
Type I restriction-modification system methyltransferase subunit (633 aa)
              0.553
PBAL39_19130
Putative type I restriction-modification system, S subunit (394 aa)
              0.552
PBAL39_19115
DEAD/DEAH box helicase (1006 aa)
              0.552
PBAL39_19125
ATP binding protein (462 aa)
              0.519
PBAL39_19120
Uncharacterized protein (244 aa)
              0.519
PBAL39_04563
Uncharacterized protein (212 aa)
   
          0.516
PBAL39_19110
Uncharacterized protein (158 aa)
              0.515
PBAL39_19105
Methionine sulfoxide reductase A (282 aa)
              0.510
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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