STRINGSTRING
PBAL39_19280 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_19280" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_19280Uncharacterized protein (229 aa)    
Predicted Functional Partners:
PBAL39_19285
GCN5-related N-acetyltransferase (157 aa)
   
        0.862
PBAL39_19295
Aspartokinase (424 aa)
   
        0.710
PBAL39_19290
Uncharacterized protein (274 aa)
              0.706
PBAL39_19300
Uncharacterized protein (393 aa)
              0.656
PBAL39_19275
Putative lipoprotein (167 aa)
              0.647
proC
PCA reductase ; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline (272 aa)
 
   
  0.609
PBAL39_14484
Aspartate aminotransferase (400 aa)
   
 
    0.590
PBAL39_18299
Putative aspartate aminotransferase (397 aa)
   
 
    0.588
PBAL39_19954
Cysteine desulfurase ; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine (405 aa)
       
    0.544
PBAL39_14519
3-dehydroquinate synthase (358 aa)
 
        0.544
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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