STRINGSTRING
PBAL39_19290 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_19290" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_19290Uncharacterized protein (274 aa)    
Predicted Functional Partners:
PBAL39_19295
Aspartokinase (424 aa)
 
          0.877
PBAL39_19300
Uncharacterized protein (393 aa)
 
          0.827
PBAL39_19285
GCN5-related N-acetyltransferase (157 aa)
              0.707
PBAL39_19280
Uncharacterized protein (229 aa)
              0.706
PBAL39_09581
Uncharacterized protein (293 aa)
   
          0.626
PBAL39_19275
Putative lipoprotein (167 aa)
 
          0.622
PBAL39_05533
Uncharacterized protein (337 aa)
   
          0.580
PBAL39_06516
Lysine exporter protein (LYSE/YGGA) (207 aa)
   
          0.577
PBAL39_13467
Uncharacterized protein (315 aa)
   
          0.574
PBAL39_02242
Uncharacterized protein (263 aa)
   
          0.557
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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