STRINGSTRING
PBAL39_19305 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_19305" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_19305Uncharacterized protein (999 aa)    
Predicted Functional Partners:
PBAL39_06271
Conserved hypothetical lipoprotein (309 aa)
   
          0.776
PBAL39_06541
Putative cationic 19 kDa outer membrane protein (176 aa)
   
          0.774
PBAL39_05513
Uncharacterized protein (818 aa)
   
          0.774
PBAL39_00425
Uncharacterized protein (832 aa)
   
          0.774
PBAL39_08766
TPR domain protein (223 aa)
   
          0.772
PBAL39_06276
DNA-directed RNA polymerase subunit omega ; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (108 aa)
   
          0.769
PBAL39_12648
Outer membrane protein (808 aa)
   
          0.767
PBAL39_06546
Outer membrane protein probable bacterial surface antigen (829 aa)
   
          0.767
PBAL39_09866
Uncharacterized protein (166 aa)
   
          0.761
PBAL39_05458
Uncharacterized protein (186 aa)
   
          0.760
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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