STRINGSTRING
PBAL39_19320 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_19320" - Protease Do in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_19320Protease Do (363 aa)    
Predicted Functional Partners:
PBAL39_19325
RNA polymerase, sigma-E factor heat shock and oxidative stress (152 aa)
 
          0.947
PBAL39_24720
Tetratricopeptide TPR_2 (549 aa)
   
    0.662
PBAL39_00937
Putative ABC transport system, ATP-binding protein (581 aa)
   
   
  0.625
PBAL39_24595
Probable serine protease DO-like protein (553 aa)
   
          0.623
PBAL39_13587
Uncharacterized protein (937 aa)
   
          0.614
PBAL39_20630
Ankyrin (216 aa)
       
    0.605
PBAL39_10291
Ankyrin repeat domain protein (405 aa)
       
    0.605
PBAL39_10286
Ankyrin (450 aa)
       
    0.605
PBAL39_07410
Ankyrin-like protein (164 aa)
       
    0.605
PBAL39_14794
RNA binding protein (107 aa)
     
    0.594
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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