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PBAL39_19325 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_19325" - RNA polymerase, sigma-E factor heat shock and oxidative stress in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_19325RNA polymerase, sigma-E factor heat shock and oxidative stress (152 aa)    
Predicted Functional Partners:
PBAL39_19320
Protease Do (363 aa)
 
          0.947
PBAL39_21645
Uncharacterized protein (271 aa)
   
          0.747
PBAL39_10111
Uncharacterized protein (931 aa)
   
          0.726
PBAL39_13587
Uncharacterized protein (937 aa)
   
          0.723
PBAL39_10546
Uncharacterized protein (268 aa)
   
          0.716
PBAL39_22015
Uncharacterized protein (142 aa)
   
          0.694
PBAL39_05218
Uncharacterized protein (540 aa)
   
          0.671
PBAL39_09381
Uncharacterized protein (333 aa)
   
          0.669
PBAL39_20850
Uncharacterized protein (95 aa)
   
          0.650
PBAL39_18099
Pseudouridylate synthase (240 aa)
   
          0.644
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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