STRINGSTRING
PBAL39_19409 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_19409" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_19409Uncharacterized protein (194 aa)    
Predicted Functional Partners:
PBAL39_19399
Oxidoreductase, iron-sulphur binding subunit (246 aa)
 
          0.978
PBAL39_19404
Uncharacterized protein (465 aa)
 
     
  0.976
PBAL39_01192
Oxidoreductase (242 aa)
 
          0.819
PBAL39_04783
Possible ferrodoxin (462 aa)
 
     
  0.792
PBAL39_19394
PurR (344 aa)
              0.601
kduI
DKI isomerase ; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate (297 aa)
              0.539
PBAL39_19384
Uncharacterized protein (380 aa)
              0.499
PBAL39_19379
Phosphatidylserine decarboxylase (256 aa)
              0.410
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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