STRINGSTRING
PBAL39_19464 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_19464" - YcsG in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_19464YcsG (392 aa)    
Predicted Functional Partners:
PBAL39_19474
Putative allophanate hydrolase (573 aa)
 
   
  0.988
PBAL39_19469
UPF0271 protein PBAL39_19469 (257 aa)
 
   
  0.969
PBAL39_19459
Uncharacterized protein (245 aa)
              0.859
PBAL39_19479
Peptidase E (234 aa)
              0.644
PBAL39_19454
Signal transduction histidine kinase (711 aa)
              0.517
PBAL39_05723
NADH dehydrogenase I chain F (453 aa)
       
      0.475
PBAL39_21755
Fumarylacetoacetate hydrolase family protein (332 aa)
       
      0.461
PBAL39_06776
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, fumarylacetoacetate hydrolase family protein (203 aa)
       
      0.461
PBAL39_05423
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (285 aa)
       
      0.461
PBAL39_19484
Uncharacterized protein (694 aa)
              0.460
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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