STRINGSTRING
PBAL39_19514 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_19514" - Membrane-fusion protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_19514Membrane-fusion protein (330 aa)    
Predicted Functional Partners:
PBAL39_19509
AcrB/AcrD/AcrF family protein (1021 aa)
 
   
  0.970
PBAL39_19519
Outer membrane efflux protein (445 aa)
 
          0.920
PBAL39_16821
Cation efflux protein (1042 aa)
 
   
  0.750
PBAL39_04293
Multidrug efflux membrane fusion protein (1034 aa)
 
   
  0.714
PBAL39_04169
Cation efflux protein (1063 aa)
 
   
  0.700
PBAL39_22335
Efflux transporter, RND family, MFP subunit (360 aa)
   
          0.667
PBAL39_01792
ABC transporter permease (416 aa)
   
          0.654
PBAL39_17764
Acriflavin resistance protein D (1068 aa)
 
   
  0.652
PBAL39_17759
Acriflavine resistance protein E (387 aa)
   
          0.632
PBAL39_03105
Multidrug resistance protein, AcrB/AcrD family (1064 aa)
 
   
  0.615
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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