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STRINGSTRING
EDM36111.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM36111.1" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM36111.1Uncharacterized protein (486 aa)    
Predicted Functional Partners:
EDM36110.1
annotation not available (28 aa)
              0.578
EDM36483.1
Uncharacterized protein; COG2378 Predicted transcriptional regulator (340 aa)
 
          0.494
EDM36109.1
Possible oxidoreductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (253 aa)
              0.464
EDM36477.1
Uncharacterized protein; COG3541 Predicted nucleotidyltransferase (353 aa)
 
          0.427
EDM36478.1
Uncharacterized protein; COG3541 Predicted nucleotidyltransferase (251 aa)
 
          0.414
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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