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PBAL39_19574 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_19574" - Sodium/hydrogen antiporter in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_19574Sodium/hydrogen antiporter (524 aa)    
Predicted Functional Partners:
PBAL39_19569
Putative ABC-transporter membrane-spanning ATP-binding component (580 aa)
   
    0.792
PBAL39_19564
Uncharacterized protein (125 aa)
              0.557
PBAL39_22225
Uncharacterized protein (182 aa)
     
 
    0.475
PBAL39_16841
Beta-Ig-H3/fasciclin (324 aa)
     
 
    0.475
PBAL39_02102
Glutamate synthase, large subunit (1182 aa)
   
        0.442
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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