STRINGSTRING
PBAL39_19594 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_19594" - Ribonuclease HI in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_19594Ribonuclease HI (157 aa)    
Predicted Functional Partners:
PBAL39_12007
DNA polymerase I (937 aa)
 
  0.946
PBAL39_11992
Alkyl hydroperoxide reductase AhpD ; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity (113 aa)
            0.760
PBAL39_18414
DNA polymerase III, epsilon subunit (456 aa)
   
 
  0.724
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (509 aa)
   
   
  0.681
rnhB
Ribonuclease HII ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (203 aa)
     
 
  0.606
PBAL39_10561
Single-stranded DNA-binding protein (142 aa)
   
 
  0.593
dnaG
DNA primase ; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication (668 aa)
 
     
  0.576
PBAL39_10950
DNA polymerase III gamma/tau subunit (382 aa)
   
 
  0.570
PBAL39_22320
DNA-directed DNA polymerase (1074 aa)
   
 
  0.564
PBAL39_06841
DNA-directed DNA polymerase (1477 aa)
   
 
  0.564
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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