STRINGSTRING
PBAL39_19689 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_19689" - Hydrolase in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_19689Hydrolase (279 aa)    
Predicted Functional Partners:
PBAL39_22665
Rhodanese-like domain protein (124 aa)
 
   
  0.611
PBAL39_19684
Dihydrolipoyl dehydrogenase (462 aa)
   
   
  0.611
PBAL39_19974
Uncharacterized protein (127 aa)
   
 
  0.597
PBAL39_16986
Dioxygenase (311 aa)
   
 
  0.597
PBAL39_11080
Putative glyoxalase family protein (130 aa)
   
 
  0.597
PBAL39_04244
4-enzyme protein- 3-hydroxyacyl-CoA dehydrogenase 3-hydroxybutyryl-CoA epimerase (801 aa)
 
   
    0.558
PBAL39_10711
NADH oxidase/rhodanese-related sulfurtransferase (106 aa)
       
  0.547
PBAL39_08711
Metallo-beta-lactamase superfamily protein (471 aa)
       
  0.547
PBAL39_05913
D-lactate dehydrogenase (328 aa)
   
 
    0.544
PBAL39_03754
Putative glycerate dehydrogenase (324 aa)
   
 
    0.544
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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