STRINGSTRING
PBAL39_19714 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_19714" - Carboxyl-terminal protease in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_19714Carboxyl-terminal protease (536 aa)    
Predicted Functional Partners:
PBAL39_19719
Uncharacterized protein (202 aa)
              0.734
PBAL39_19724
Uncharacterized protein (165 aa)
              0.655
lolD
Lipoprotein-releasing system ATP-binding protein LolD ; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner (216 aa)
              0.637
PBAL39_05323
Putative capsule polysaccharide export protein (824 aa)
   
          0.521
sucC
Succinyl-CoA synthetase subunit beta (396 aa)
              0.487
PBAL39_06906
Uncharacterized protein (218 aa)
   
          0.476
PBAL39_06226
Uncharacterized protein (271 aa)
   
          0.445
PBAL39_19205
Uncharacterized protein (171 aa)
   
          0.435
PBAL39_17549
Uncharacterized protein (316 aa)
   
          0.427
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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