STRINGSTRING
EDM36145.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM36145.1" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM36145.1Uncharacterized protein; COG1011 Predicted hydrolase (HAD superfamily) (202 aa)    
Predicted Functional Partners:
EDM36144.1
COG0793 Periplasmic protease (536 aa)
 
          0.782
EDM37227.1
annotation not available (326 aa)
   
          0.779
EDM35050.1
annotation not available (669 aa)
   
          0.778
EDM35990.1
COG3637 Opacity protein and related surface antigens (279 aa)
   
          0.776
EDM36452.1
annotation not available (237 aa)
   
          0.774
lolD
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner; Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family (216 aa)
              0.773
EDM35101.1
annotation not available (213 aa)
   
          0.766
EDM36146.1
annotation not available (165 aa)
              0.765
pyrE
annotation not available (132 aa)
   
          0.765
EDM37371.1
annotation not available (331 aa)
   
          0.764
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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