STRINGSTRING
PBAL39_19874 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_19874" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_19874Uncharacterized protein (270 aa)    
Predicted Functional Partners:
PBAL39_05568
Sugar transferase (300 aa)
            0.707
PBAL39_19879
Putative glycosyltransferase (286 aa)
              0.656
PBAL39_19869
Uncharacterized protein (67 aa)
              0.623
PBAL39_19884
Uncharacterized protein (127 aa)
              0.575
PBAL39_19889
Sugar pyridoxal-phosphate-dependent aminotransferase (362 aa)
              0.536
PBAL39_14334
Sugar transferase (311 aa)
            0.501
PBAL39_19864
Transcriptional regulator, ArsR family protein (99 aa)
              0.475
PBAL39_19899
Putative RNA polymerase sigma factor (194 aa)
              0.433
PBAL39_19894
Uncharacterized protein (161 aa)
              0.433
PBAL39_19914
Uncharacterized protein (293 aa)
              0.429
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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