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PBAL39_19934 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_19934" - FeS assembly protein SufB in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_19934FeS assembly protein SufB (57 aa)    
Predicted Functional Partners:
PBAL39_19939
Component of SufBCD complex (431 aa)
              0.859
PBAL39_19944
Iron-regulated ABC transporter, ATP-binding protein (253 aa)
              0.752
PBAL39_19949
Iron-regulated ABC transporter, membrane-spanning permease (435 aa)
 
          0.738
PBAL39_19959
Uncharacterized protein (146 aa)
              0.680
PBAL39_19954
Cysteine desulfurase ; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine (405 aa)
              0.680
PBAL39_19969
Transcriptional regulator, BadM/Rrf2 family protein (156 aa)
 
          0.577
PBAL39_19929
Transcriptional regulator, AraC family protein (286 aa)
              0.541
PBAL39_19964
Uncharacterized protein (105 aa)
              0.524
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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