STRINGSTRING
PBAL39_19974 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_19974" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_19974Uncharacterized protein (127 aa)    
Predicted Functional Partners:
PBAL39_02102
Glutamate synthase, large subunit (1182 aa)
     
  0.988
PBAL39_08711
Metallo-beta-lactamase superfamily protein (471 aa)
   
 
  0.872
PBAL39_19979
Putative oxidoreductase (340 aa)
   
        0.863
PBAL39_19984
Uncharacterized protein (145 aa)
              0.859
trpB
Tryptophan synthase beta chain ; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine (393 aa)
     
    0.729
PBAL39_23072
NonF-related protein (226 aa)
   
    0.728
PBAL39_05593
Proteinase I (187 aa)
   
    0.728
PBAL39_25050
Propionyl-CoA carboxylase beta subunit (542 aa)
   
 
  0.725
PBAL39_01842
Aldehyde-alcohol dehydrogenase (876 aa)
   
 
  0.718
PBAL39_04753
Biotin carboxyl carrier protein of acetyl-CoA carboxylase (159 aa)
       
  0.690
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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