STRINGSTRING
PBAL39_19984 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_19984" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_19984Uncharacterized protein (145 aa)    
Predicted Functional Partners:
PBAL39_19974
Uncharacterized protein (127 aa)
              0.859
PBAL39_19979
Putative oxidoreductase (340 aa)
              0.859
PBAL39_19994
Multi-sensor hybrid histidine kinase (547 aa)
              0.655
PBAL39_19989
Uncharacterized protein (32 aa)
              0.655
PBAL39_20004
Putative outer membrane protein (1160 aa)
              0.431
PBAL39_19999
Putative outer membrane protein (601 aa)
              0.431
PBAL39_24950
UDP-N-acetylmuramate-L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (451 aa)
   
          0.424
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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