STRINGSTRING
PBAL39_20074 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_20074" - Cupin 2, conserved barrel in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_20074Cupin 2, conserved barrel (168 aa)    
Predicted Functional Partners:
PBAL39_21290
Uncharacterized protein (196 aa)
   
          0.523
PBAL39_20079
Transcriptional regulator, MarR family protein (116 aa)
              0.500
PBAL39_04498
Uncharacterized protein (725 aa)
   
          0.468
PBAL39_04408
Uncharacterized protein (306 aa)
   
          0.451
PBAL39_13377
Uncharacterized protein (2830 aa)
   
          0.441
PBAL39_14024
NUDIX hydrolase (165 aa)
   
          0.419
PBAL39_21105
Putative isomerase (118 aa)
   
          0.410
PBAL39_07720
Two-component hybrid sensor and regulator (1253 aa)
   
          0.402
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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