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PBAL39_20134 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_20134" - Short-chain dehydrogenase/reductase SDR in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_20134Short-chain dehydrogenase/reductase SDR (250 aa)    
Predicted Functional Partners:
PBAL39_20144
Uncharacterized protein (121 aa)
 
       
0.663
PBAL39_12885
Putative short-chain dehydrogenase (111 aa)
   
          0.626
PBAL39_08085
3-oxoacyl-[acyl-carrier-protein] reductase (247 aa)
   
   
0.614
PBAL39_20139
Cyclic nucleotide binding-regulatory protein (94 aa)
              0.612
PBAL39_20129
Cyclic nucleotide binding-regulatory protein (196 aa)
              0.606
PBAL39_19379
Phosphatidylserine decarboxylase (256 aa)
   
   
0.596
PBAL39_21740
Probable dehydrogenase/reductase (233 aa)
   
   
 
0.449
PBAL39_05088
Short chain dehydrogenase (269 aa)
   
   
 
0.430
PBAL39_18534
Short chain dehydrogenase (321 aa)
   
   
 
0.427
PBAL39_19789
Short chain dehydrogenase (271 aa)
   
   
 
0.424
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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