STRINGSTRING
PBAL39_20139 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_20139" - Cyclic nucleotide binding-regulatory protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_20139Cyclic nucleotide binding-regulatory protein (94 aa)    
Predicted Functional Partners:
PBAL39_20144
Uncharacterized protein (121 aa)
              0.859
PBAL39_16479
Cyclic nucleotide binding-regulatory protein (100 aa)
   
          0.750
PBAL39_21100
Cyclic nucleotide binding regulatory protein (97 aa)
   
          0.717
PBAL39_22680
Uncharacterized protein (134 aa)
   
          0.708
PBAL39_20134
Short-chain dehydrogenase/reductase SDR (250 aa)
              0.612
PBAL39_02645
Uncharacterized protein (279 aa)
   
          0.590
PBAL39_24370
Uncharacterized protein (164 aa)
   
          0.529
PBAL39_25500
Uncharacterized protein (168 aa)
   
          0.526
PBAL39_07250
Carbohydrate kinase, FGGY (451 aa)
   
          0.515
PBAL39_02910
Transcriptional regulator, MarR family protein (316 aa)
   
          0.514
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (3%) [HD]