STRINGSTRING
PBAL39_20209 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_20209" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_20209Uncharacterized protein (107 aa)    
Predicted Functional Partners:
PBAL39_20214
Putative oxidoreductase (264 aa)
 
          0.968
PBAL39_17379
Putative oxidoreductase (263 aa)
 
          0.829
PBAL39_20219
Uncharacterized protein (140 aa)
 
          0.770
PBAL39_04074
Uncharacterized protein (376 aa)
   
          0.592
PBAL39_16399
Transcriptional regulator, MarR family protein (161 aa)
   
          0.553
PBAL39_21115
Uncharacterized protein (506 aa)
   
          0.545
PBAL39_05818
Uncharacterized protein (137 aa)
   
          0.528
PBAL39_20319
B-glycosidase, glycoside hydrolase family 16 protein (301 aa)
   
          0.527
PBAL39_12845
Uncharacterized protein (509 aa)
   
          0.514
PBAL39_22240
Uncharacterized protein (470 aa)
   
          0.510
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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