STRINGSTRING
PBAL39_20224 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_20224" - Putative transcriptional regulator in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_20224Putative transcriptional regulator (560 aa)    
Predicted Functional Partners:
PBAL39_19130
Putative type I restriction-modification system, S subunit (394 aa)
   
        0.617
PBAL39_19115
DEAD/DEAH box helicase (1006 aa)
   
        0.617
PBAL39_19135
Type I restriction-modification system methyltransferase subunit (633 aa)
   
   
  0.609
recG
ATP-dependent DNA helicase RecG ; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3’- to 5’- polarity. Unwinds branched duplex DNA (Y-DNA) (701 aa)
       
    0.530
PBAL39_03170
Superfamily II DNA/RNA helicase, SNF2 family protein (1139 aa)
 
          0.459
PBAL39_24785
RNA polymerase, sigma-54 factor (489 aa)
     
        0.404
PBAL39_07955
NAD-dependent epimerase/dehydratase (216 aa)
   
        0.402
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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