STRINGSTRING
PBAL39_20334 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_20334" - Putative outer membrane protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_20334Putative outer membrane protein (582 aa)    
Predicted Functional Partners:
PBAL39_20339
Putative outer membrane protein (1019 aa)
 
          0.954
PBAL39_23647
Uncharacterized protein (228 aa)
   
          0.773
PBAL39_20364
Putative lipoprotein (502 aa)
   
          0.767
PBAL39_13939
Putative outer membrane protein (565 aa)
   
          0.762
PBAL39_13310
Putative outer membrane protein (1009 aa)
   
          0.755
PBAL39_20359
Putative outer membrane protein (1187 aa)
   
          0.741
PBAL39_20329
Uncharacterized protein (513 aa)
              0.721
PBAL39_13944
Uncharacterized protein (1098 aa)
   
          0.716
PBAL39_18479
Putative lipoprotein (442 aa)
   
          0.708
PBAL39_18484
Uncharacterized protein (1117 aa)
   
          0.692
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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