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PBAL39_20349 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_20349" - Putative RNA polymerase ECF-type sigma factor in Pedobacter sp. BAL39
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_20349Putative RNA polymerase ECF-type sigma factor (194 aa)    
Predicted Functional Partners:
PBAL39_08791
RNA polymerase, sigma-E factor heat shock and oxidative stress (183 aa)
   
          0.679
PBAL39_25095
Putative RNA polymerase sigma factor (152 aa)
   
          0.673
PBAL39_11777
Putative RNA polymerase sigma factor (194 aa)
   
          0.658
PBAL39_20354
Putative anti-sigma factor (370 aa)
              0.645
PBAL39_24038
RNA polymerase sigma factor/ECF subfamily (Sigma-70) (191 aa)
   
          0.638
PBAL39_00255
RNA polymerase, sigma-E factor heat shock and oxidative stress (190 aa)
   
          0.614
PBAL39_20344
Two-component system sensor histidine kinase/response regulator, hybrid (’one-component system’) (253 aa)
              0.558
PBAL39_11897
RNA polymerase, sigma-24 subunit, ECF subfamily protein (150 aa)
   
          0.484
PBAL39_20359
Putative outer membrane protein (1187 aa)
              0.421
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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