STRINGSTRING
PBAL39_20580 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_20580" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_20580Uncharacterized protein (295 aa)    
Predicted Functional Partners:
PBAL39_20585
CHU large protein uncharacterized (174 aa)
 
          0.963
PBAL39_03629
Uncharacterized protein (176 aa)
   
          0.773
PBAL39_00030
Uncharacterized protein (169 aa)
   
          0.766
PBAL39_25285
CHU large protein uncharacterized (251 aa)
   
          0.758
PBAL39_17549
Uncharacterized protein (316 aa)
   
          0.756
PBAL39_20575
Uncharacterized protein (624 aa)
              0.741
PBAL39_04323
Uncharacterized protein (1168 aa)
   
          0.731
PBAL39_17514
Uncharacterized protein (811 aa)
   
          0.724
PBAL39_14824
Cell surface protein (286 aa)
   
          0.711
PBAL39_12212
Uncharacterized protein (810 aa)
   
          0.710
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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