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PBAL39_20590 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_20590" - Transcriptional regulator, TetR family protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_20590Transcriptional regulator, TetR family protein (210 aa)    
Predicted Functional Partners:
PBAL39_15234
Glyoxalase family protein (117 aa)
   
          0.580
PBAL39_14819
Uncharacterized protein (505 aa)
   
          0.554
PBAL39_15339
Putative hemolysin secretion protein (437 aa)
   
          0.518
PBAL39_11215
Uncharacterized protein (218 aa)
   
          0.502
PBAL39_03509
Uncharacterized protein (571 aa)
   
          0.472
PBAL39_15344
ABC transporter ATP-binding protein (769 aa)
   
          0.463
PBAL39_20585
CHU large protein uncharacterized (174 aa)
              0.458
PBAL39_20580
Uncharacterized protein (295 aa)
              0.458
PBAL39_14054
Putative transmembrane protein (297 aa)
   
          0.433
PBAL39_01297
Putative dehalogenase-hydrolase (231 aa)
   
          0.424
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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