STRINGSTRING
rho protein (Pedobacter sp. BAL39) - STRING interaction network
"rho" - ATP-dependent helicase Rho in Pedobacter sp. BAL39
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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rhoATP-dependent helicase Rho ; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho’s RNA-dependent ATPase activity, and release of the mRNA from the DNA template (564 aa)    
Predicted Functional Partners:
nusG
Transcription termination/antitermination protein NusG ; Participates in transcription elongation, termination and antitermination (180 aa)
     
 
  0.808
PBAL39_20660
CDP-diacylglycerol-serine-O-phosphatidyltransferase (252 aa)
              0.786
rpsA
30S ribosomal protein S1 (644 aa)
 
   
  0.766
PBAL39_12007
DNA polymerase I (937 aa)
 
   
  0.720
mraY
UDP-MurNAc-pentapeptide phosphotransferase ; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan (415 aa)
 
        0.665
PBAL39_13552
Protein-export membrane protein SecD/SecF ; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (987 aa)
 
   
  0.641
ctc
General stress protein CTC ; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance (192 aa)
 
   
  0.637
rpoC
Transcriptase subunit beta’ ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1428 aa)
 
   
  0.614
groS
Protein Cpn10 ; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter (96 aa)
   
     
  0.566
PBAL39_04833
Malic enzyme (767 aa)
         
  0.558
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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