STRINGSTRING
PBAL39_20685 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_20685" - DNA polymerase IV, family X in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_20685DNA polymerase IV, family X (542 aa)    
Predicted Functional Partners:
PBAL39_20615
Metal-dependent hydrolase (254 aa)
     
      0.975
PBAL39_07840
Metallo-beta-lactamase superfamily protein (263 aa)
     
      0.975
hisB
Histidine biosynthesis bifunctional protein HisB (377 aa)
   
  0.950
hisI
Histidine biosynthesis bifunctional protein HisIE (196 aa)
   
 
  0.916
hisD
Histidinol dehydrogenase ; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine (428 aa)
   
 
  0.904
hisC
Imidazole acetol-phosphate transaminase (347 aa)
   
 
  0.899
PBAL39_01937
Putative aminotransferase (401 aa)
   
 
  0.899
PBAL39_16896
ATP-dependent DNA ligase (908 aa)
 
  0.874
PBAL39_18274
DNA ligase (530 aa)
   
  0.848
PBAL39_20695
Heptosyltransferase (354 aa)
              0.819
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (6%) [HD]