STRINGSTRING
PBAL39_20695 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_20695" - Heptosyltransferase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_20695Heptosyltransferase (354 aa)    
Predicted Functional Partners:
PBAL39_20690
Uncharacterized protein (200 aa)
 
          0.972
PBAL39_03669
3-deoxy-D-manno-octulosonic-acid transferase (403 aa)
 
 
  0.900
PBAL39_20685
DNA polymerase IV, family X (542 aa)
              0.819
PBAL39_06891
Mannosyltransferase (372 aa)
 
 
  0.817
PBAL39_23012
Probable galactosyltransferase (364 aa)
   
 
  0.706
PBAL39_16701
Putative glycosyltransferase (434 aa)
   
 
  0.706
PBAL39_13787
Uncharacterized protein (315 aa)
   
 
  0.706
PBAL39_10466
Mannosyltransferase (364 aa)
   
 
  0.706
PBAL39_09361
A-glycosyltransferase-related protein, glycosyltransferase family 4 protein (400 aa)
   
 
  0.706
PBAL39_08836
A-glycosyltransferase-related protein, glycosyltransferase family 4 protein (379 aa)
   
 
  0.706
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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