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PBAL39_20725 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_20725" - ABC-type Fe3+-siderophores transport system in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_20725ABC-type Fe3+-siderophores transport system (264 aa)    
Predicted Functional Partners:
PBAL39_18174
Permease protein of ABC transporter (348 aa)
 
  0.864
PBAL39_18169
Hemin-binding periplasmic protein (276 aa)
   
   
    0.777
rnr
Ribonuclease R ; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (709 aa)
     
      0.768
PBAL39_20730
ABC transporter, ATPase subunit (229 aa)
   
 
  0.751
PBAL39_18179
Hemin ABC transporter ATP binding protein (265 aa)
 
   
  0.734
PBAL39_01517
Non-ribosomal peptide synthetase/polyketide synthase (2233 aa)
     
 
  0.699
PBAL39_00300
TonB-dependent siderophore receptor (813 aa)
 
 
  0.692
PBAL39_18809
Ferrichrome-iron receptor (904 aa)
 
 
  0.687
PBAL39_20735
Putative FtsX-related transmembrane transport protein (796 aa)
              0.642
PBAL39_23402
Ferrichrome-iron receptor (801 aa)
   
 
  0.637
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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