STRINGSTRING
PBAL39_20835 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_20835" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_20835Uncharacterized protein (143 aa)    
Predicted Functional Partners:
PBAL39_20830
CDP-alcohol phosphatidyltransferase (241 aa)
 
          0.957
PBAL39_16741
Uncharacterized protein (437 aa)
   
          0.719
PBAL39_25365
Uncharacterized protein (862 aa)
   
          0.661
PBAL39_14799
Glycoside hydrolase family 2, sugar binding protein (1081 aa)
   
          0.611
PBAL39_20965
Uncharacterized protein (485 aa)
   
          0.594
PBAL39_20319
B-glycosidase, glycoside hydrolase family 16 protein (301 aa)
   
          0.592
PBAL39_01262
Uncharacterized protein (578 aa)
   
          0.586
PBAL39_05753
TPR repeat-containing protein (571 aa)
   
          0.576
PBAL39_14169
Uncharacterized protein (405 aa)
   
          0.572
PBAL39_13175
Uncharacterized protein (525 aa)
   
          0.543
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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